Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548n in MPM Mesothelioma Gordon Cluster 65 Table contains all genes in the MPM Mesothelioma Gordon cluster number 65. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548n 9553 MRPL33 mitochondrial ribosomal protein L33 [Source:HGNC Symbol;Acc:14487] zzz999 10165 SLC25A13 solute carrier family 25, member 13 (citrin) [Source:HGNC Symbol;Acc:10983] T 646 BNC1 basonuclin 1 [Source:HGNC Symbol;Acc:1081] zzz999 26608 TBL2 transducin (beta)-like 2 [Source:HGNC Symbol;Acc:11586] T 3660 IRF2 interferon regulatory factor 2 [Source:HGNC Symbol;Acc:6117] T 9637 FEZ2 fasciculation and elongation protein zeta 2 (zygin II) [Source:HGNC Symbol;Acc:3660] T 55746 NUP133 nucleoporin 133kDa [Source:HGNC Symbol;Acc:18016] zzz999 64786 TBC1D15 TBC1 domain family, member 15 [Source:HGNC Symbol;Acc:25694] zzz999 2218 FKTN fukutin [Source:HGNC Symbol;Acc:3622] T 51108 METTL9 methyltransferase like 9 [Source:HGNC Symbol;Acc:24586] zzz999 9643 MORF4L2 mortality factor 4 like 2 [Source:HGNC Symbol;Acc:16849] zzz999 81929 SEH1L SEH1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:30379] P 657 BMPR1A bone morphogenetic protein receptor, type IA [Source:HGNC Symbol;Acc:1076] T 10073 SNUPN snurportin 1 [Source:HGNC Symbol;Acc:14245] zzz999 5198 PFAS phosphoribosylformylglycinamidine synthase [Source:HGNC Symbol;Acc:8863] zzz999 466 ATF1 activating transcription factor 1 [Source:HGNC Symbol;Acc:783] T 54165 DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:18184] T 9488 PIGB phosphatidylinositol glycan anchor biosynthesis, class B [Source:HGNC Symbol;Acc:8959] zzz999 55900 ZNF302 zinc finger protein 302 [Source:HGNC Symbol;Acc:13848] T 23421 ITGB3BP integrin beta 3 binding protein (beta3-endonexin) [Source:HGNC Symbol;Acc:6157] T 80010 RMI1 RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25764] T 51112 TTC15 tetratricopeptide repeat domain 15 [Source:HGNC Symbol;Acc:24284] zzz999 55216 C11orf57 chromosome 11 open reading frame 57 [Source:HGNC Symbol;Acc:25569] zzz999 55364 IMPACT Impact homolog (mouse) [Source:HGNC Symbol;Acc:20387] T 27089 UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa [Source:HGNC Symbol;Acc:29594] zzz999 93034 NT5C1B 5'-nucleotidase, cytosolic IB [Source:HGNC Symbol;Acc:17818] zzz999 79830 ZMYM1 zinc finger, MYM-type 1 [Source:HGNC Symbol;Acc:26253] T 4065 LY75 lymphocyte antigen 75 [Source:HGNC Symbol;Acc:6729] T 7358 UGDH UDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:12525] zzz999 79811 SLTM SAFB-like, transcription modulator [Source:HGNC Symbol;Acc:20709] T 8443 GNPAT glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:4416] T 79738 BBS10 Bardet-Biedl syndrome 10 [Source:HGNC Symbol;Acc:26291] T 23272 C3orf63 chromosome 3 open reading frame 63 [Source:HGNC Symbol;Acc:30314] P T 7637 ZNF84 Zinc finger protein 84 [Source:UniProtKB/Swiss-Prot;Acc:P51523] T 56913 C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 [Source:HGNC Symbol;Acc:24337] zzz999 5876 RABGGTB Rab geranylgeranyltransferase, beta subunit [Source:HGNC Symbol;Acc:9796] zzz999 64418 TMEM168 transmembrane protein 168 [Source:HGNC Symbol;Acc:25826] T 90333 ZNF468 zinc finger protein 468 [Source:HGNC Symbol;Acc:33105] T 112479 ERI2 ERI1 exoribonuclease family member 2 [Source:HGNC Symbol;Acc:30541] zzz999 113251 LARP4 La ribonucleoprotein domain family, member 4 [Source:HGNC Symbol;Acc:24320] P T 5901 RAN RAN, member RAS oncogene family [Source:HGNC Symbol;Acc:9846] zzz999 79837 PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma [Source:HGNC Symbol;Acc:23786] zzz999 6787 NEK4 NIMA (never in mitosis gene a)-related kinase 4 [Source:HGNC Symbol;Acc:11399] T 79003 MIS12 MIS12, MIND kinetochore complex component, homolog (S. pombe) [Source:HGNC Symbol;Acc:24967] T 245711 SPDYA speedy homolog A (Xenopus laevis) [Source:HGNC Symbol;Acc:30613] T 6873 TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa [Source:HGNC Symbol;Acc:11536] P T 79675 FASTKD1 FAST kinase domains 1 [Source:HGNC Symbol;Acc:26150] zzz999 84890 ADO 2-aminoethanethiol (cysteamine) dioxygenase [Source:HGNC Symbol;Acc:23506] T 53339 BTBD1 BTB (POZ) domain containing 1 [Source:HGNC Symbol;Acc:1120] zzz999 79664 NARG2 NMDA receptor regulated 2 [Source:HGNC Symbol;Acc:29885] T 2332 FMR1 fragile X mental retardation 1 [Source:HGNC Symbol;Acc:3775] P T 9821 RB1CC1 RB1-inducible coiled-coil 1 [Source:HGNC Symbol;Acc:15574] P T 79029 SPATA5L1 spermatogenesis associated 5-like 1 [Source:HGNC Symbol;Acc:28762] T 4677 NARS asparaginyl-tRNA synthetase [Source:HGNC Symbol;Acc:7643] zzz999 522 ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 [Source:HGNC Symbol;Acc:847] zzz999 64343 AZI2 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:24002] T 34 ACADM acyl-CoA dehydrogenase, C-4 to C-12 straight chain [Source:HGNC Symbol;Acc:89] T 9831 ZNF623 zinc finger protein 623 [Source:HGNC Symbol;Acc:29084] zzz999 81892 C14orf156 chromosome 14 open reading frame 156 [Source:HGNC Symbol;Acc:20495] zzz999 60313 GPBP1L1 GC-rich promoter binding protein 1-like 1 [Source:HGNC Symbol;Acc:28843] P T 97 ACYP1 acylphosphatase 1, erythrocyte (common) type [Source:HGNC Symbol;Acc:179] T 79770 TXNDC15 thioredoxin domain containing 15 [Source:HGNC Symbol;Acc:20652] T 55035 NOL8 nucleolar protein 8 [Source:HGNC Symbol;Acc:23387] T 253943 zzz999 zzz999 T 51542 VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18652] P T 55717 WDR11 WD repeat domain 11 [Source:HGNC Symbol;Acc:13831] P T 841 CASP8 caspase 8, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1509] zzz999 7743 ZNF189 zinc finger protein 189 [Source:HGNC Symbol;Acc:12980] zzz999 23197 FAF2 Fas associated factor family member 2 [Source:HGNC Symbol;Acc:24666] T 7702 ZNF143 zinc finger protein 143 [Source:HGNC Symbol;Acc:12928] P T 25926 NOL11 nucleolar protein 11 [Source:HGNC Symbol;Acc:24557] zzz999 7155 TOP2B topoisomerase (DNA) II beta 180kDa [Source:HGNC Symbol;Acc:11990] zzz999 7257 TSNAX translin-associated factor X [Source:HGNC Symbol;Acc:12380] T 63892 THADA thyroid adenoma associated [Source:HGNC Symbol;Acc:19217] zzz999 54664 TMEM106B transmembrane protein 106B [Source:HGNC Symbol;Acc:22407] T 1998 ELF2 E74-like factor 2 (ets domain transcription factor) [Source:HGNC Symbol;Acc:3317] zzz999 55245 UQCC ubiquinol-cytochrome c reductase complex chaperone [Source:HGNC Symbol;Acc:15891] zzz999 8798 DYRK4 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4 [Source:HGNC Symbol;Acc:3095] zzz999 8019 BRD3 bromodomain containing 3 [Source:HGNC Symbol;Acc:1104] zzz999 7507 XPA xeroderma pigmentosum, complementation group A [Source:HGNC Symbol;Acc:12814] zzz999 51427 ZNF107 zinc finger protein 107 [Source:HGNC Symbol;Acc:12887] T 26589 MRPL46 mitochondrial ribosomal protein L46 [Source:HGNC Symbol;Acc:1192] zzz999 8939 FUBP3 far upstream element (FUSE) binding protein 3 [Source:HGNC Symbol;Acc:4005] T 54665 RSBN1 round spermatid basic protein 1 [Source:HGNC Symbol;Acc:25642] P T 84908 FAM136A family with sequence similarity 136, member A [Source:HGNC Symbol;Acc:25911] zzz999 9419 CRIPT cysteine-rich PDZ-binding protein [Source:HGNC Symbol;Acc:14312] T 51109 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) [Source:HGNC Symbol;Acc:17964] zzz999 54521 WDR44 WD repeat domain 44 [Source:HGNC Symbol;Acc:30512] P T 56986 DTWD1 DTW domain containing 1 [Source:HGNC Symbol;Acc:30926] zzz999 4594 MUT methylmalonyl CoA mutase [Source:HGNC Symbol;Acc:7526] T 54927 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:21906] zzz999 25898 RCHY1 ring finger and CHY zinc finger domain containing 1 [Source:HGNC Symbol;Acc:17479] T 79441 HAUS3 HAUS augmin-like complex, subunit 3 [Source:HGNC Symbol;Acc:28719] zzz999 23560 GTPBP4 GTP binding protein 4 [Source:HGNC Symbol;Acc:21535] zzz999 55656 INTS8 integrator complex subunit 8 [Source:HGNC Symbol;Acc:26048] T 10302 SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa [Source:HGNC Symbol;Acc:15484] zzz999 5378 PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9121] zzz999 55751 TMEM184C transmembrane protein 184C [Source:HGNC Symbol;Acc:25587] T 22944 KIN KIN, antigenic determinant of recA protein homolog (mouse) [Source:HGNC Symbol;Acc:6327] zzz999 64759 TNS3 tensin 3 [Source:HGNC Symbol;Acc:21616] P T 25801 GCA grancalcin, EF-hand calcium binding protein [Source:HGNC Symbol;Acc:15990] T 9352 TXNL1 thioredoxin-like 1 [Source:HGNC Symbol;Acc:12436] zzz999 22930 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) [Source:HGNC Symbol;Acc:17063] zzz999 10664 CTCF CCCTC-binding factor (zinc finger protein) [Source:HGNC Symbol;Acc:13723] zzz999 81627 TRMT1L TRM1 tRNA methyltransferase 1-like [Source:HGNC Symbol;Acc:16782] zzz999 1070 CETN3 centrin, EF-hand protein, 3 [Source:HGNC Symbol;Acc:1868] zzz999 9129 PRPF3 PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17348] zzz999 4528 MTIF2 mitochondrial translational initiation factor 2 [Source:HGNC Symbol;Acc:7441] zzz999 29978 UBQLN2 ubiquilin 2 [Source:HGNC Symbol;Acc:12509] P T 10285 SMNDC1 survival motor neuron domain containing 1 [Source:HGNC Symbol;Acc:16900] T 10845 CLPX ClpX caseinolytic peptidase X homolog (E. coli) [Source:HGNC Symbol;Acc:2088] zzz999 5257 PHKB phosphorylase kinase, beta [Source:HGNC Symbol;Acc:8927] zzz999 7341 SUMO1 SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:12502] P T 55622 TTC27 tetratricopeptide repeat domain 27 [Source:HGNC Symbol;Acc:25986] zzz999 79893 GGNBP2 gametogenetin binding protein 2 [Source:HGNC Symbol;Acc:19357] zzz999 9782 MATR3 matrin 3 [Source:HGNC Symbol;Acc:6912] zzz999 4697 NDUFA4 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa [Source:HGNC Symbol;Acc:7687] zzz999 55319 C4orf43 chromosome 4 open reading frame 43 [Source:HGNC Symbol;Acc:25638] T 1386 ATF2 activating transcription factor 2 [Source:HGNC Symbol;Acc:784] T 339448 C1orf174 chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:27915] zzz999 55888 ZNF167 zinc finger protein 167 [Source:HGNC Symbol;Acc:12955] T

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